| wt | Male Kdm6aΔ/Y |
---|
 |  | Loss | Gain |
---|
BC | Â | Â | Â |
Female-biased genes | 2048 | 708 (35%) | 97 (5%) |
Male-biased genes | 868 | 214 (25%) | 24 (3%) |
Total | 2916 | 922 (32%) | 121 (4%) |
CB | Â | Â | Â |
Female-biased genes | 285 | 90 (32%) | Â |
Male-biased genes | 323 | 77 (24%) | Â |
Total | 608 | 167 (27%) | Â |
- Genes were determined to be sex-biased in wt cells based on a ≥ twofold TPM difference cut off. Wt lists the number of female- and male-biased genes in BC and CB clones. Loss and Gain indicate the number and percentage of female- and male-biased genes that were lost or gained in KO clones. For CB cells, changes in sex-biased genes were determined by comparing values from CB Kdm6a KO cells to wt values from published data following quantile normalization (see Methods) [34]. See also Fig. 2 and Additional file 3