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Table 6 Genes significantly upregulated in males (downregulated in females)

From: Sex differences in the late first trimester human placenta transcriptome

Gene symbol

Chr

Description

Fold-change (M/F)

FDRa

FPKM in F

FPKM in M

RPS4Y1

Y

Ribosomal protein S4, Y-linked 1

203.657

0

0.01

61.83

DDX3Y

Y

DEAD-box helicase 3, Y-linked

167.730

0

0.01

21.83

KDM5D

Y

Lysine demethylase 5D

160.898

0

0.00

6.73

USP9Y

Y

Ubiquitin specific peptidase 9, Y-linked

110.661

0

0.00

6.27

ZFY

Y

Zinc finger protein, Y-linked

83.865

0

0.00

5.66

UTY

Y

Ubiquitously transcribed tetratricopeptide repeat containing, Y-linked

83.286

0

0.00

7.99

TTTY15

Y

Testis-specific transcript, Y-linked 15 (non-protein coding)

78.249

0

0.00

4.42

EIF1AY

Y

Eukaryotic translation initiation factor 1A, Y-linked

62.683

0

0.01

6.11

LINC00278

Y

Long intergenic non-protein coding RNA 278

15.671

1.51E-127

0.02

5.44

TTTY14

Y

Testis-specific transcript, Y-linked 14 (non-protein coding)

13.548

4.73E-108

0.01

1.69

ANOS2P

Y

Anosmin 2, pseudogene

12.295

2.38E-102

0.01

1.28

PCDH11Y

Y

Protocadherin 11 Y-linked

12.042

7.38E-132

0.08

2.30

TXLNGY

Y

Taxilin gamma pseudogene, Y-linked

9.714

1.44E-75

0.00

1.37

ZFY-AS1

Y

ZFY antisense RNA 1

8.056

7.64E-66

0.02

1.97

PSMA6P1

Y

Proteasome subunit alpha 6 pseudogene 1

3.482

6.21E-27

0.40

2.02

ARMCX6

X

Armadillo repeat containing, X-linked 6

1.795

7.62E-06

1.78

3.95

MTRNR2L8

11

MT-RNR2-like 8

1.613

0.0201

2.90

4.88

ARMCX3

X

Armadillo repeat containing, X-linked 3

1.609

0.000255

6.70

11.93

HMGCS2

1

3-hydroxy-3-methylglutaryl-CoA synthase 2

1.603

0.035

1.99

4.27

FRG1JP

9

FSHD region gene 1 family member J, pseudogene

1.507

0.0209

1.36

2.27

HSPB1

7

Heat shock protein family B (small) member 1

1.486

0.0482

41.94

65.09

TLE2

19

Transducin-like enhancer of split 2

1.409

0.0495

2.61

3.67

ARHGEF9

X

Cdc42 guanine nucleotide exchange factor 9

1.344

0.0416

1.28

1.75

  1. Sorted by fold-change. F = females. M = males
  2. aBenjamini-Hochberg false discovery rate