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Table 2 Autosomal gene duplication to MSY

From: The phenotypic impact of the male-specific region of chromosome-Y in inbred mating: the role of genetic variants and gene duplications in multiple inbred rat strains

Chromosome Gene SNVs Average allele frequency Strain w/o SNVs Strain-specific SNVs MSY SHR/Akr BAC MSY gene Duplication method Tissue expression
chr2 Ect2 25 23.9 ± 2.3 SBH(2), SR(2), SS(1) AC241473.5 Ect2Y_ps Retroposed None
chr8 Ube2q2 16 20.6 ± 2.1 LL(2) AC241873.4 Ube2q2Y Retroposed Ubiquitous
chr10 Havcr2 33 30.8 ± 2.3 AC241887.5 Havcr2Y_ps Retroposed None
chr10 Limd2 40 45.2 ± 2.9 LH(1), SBN(1) AC241808.7 Limd2Y_ps Retroposed None
chr12 RGD1560580 4 24.9 ± 4.5 AC241548.6 Ssty2 MSY duplication None
chr13 Xpr1 24 28.9 ± 2.1 F344(2), SBN(1) AC246656.3 Xpr1_Y1/2/3/4 Transposed None
chr13 Prrc2c 2 19.6 ± 1.8 AC241950.2 Prrc2cY_ps Retroposed None
chr14 Vom2r67 5 24.4 ± 2.7 SBH(2), SR(1) AC242505.8 Vom2rY_ps Retroposed None
chr16 Lsm1 5 24.9 ± 2.2 AC243283.4 Lsm1Y_ps Partial transposed None
chrX Med14 33 31.2 ± 3.3 FHL FHH(1) AC239701.6 Med14y Retroposed Ubiquitous