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Table 1 Representative associations of SNPs on X chromosome for combined samples

From: X-chromosome association study reveals genetic susceptibility loci of nasopharyngeal carcinoma

  Discovery (Guangdong) Replication 1 (Malaysia) Replication 2 (Taiwan) Combined analysis
Marker Position Annotation OR 95% CI P OR 95% CI P OR 95% CI P I 2 OR 95% CI P
rs5927056 31969744 DMD 0.81 0.73–0.89 1.49 × 10−5 1.01 0.83–1.22 9.47 × 10−1 0.9 0.74–1.11 3.33 × 10−1 0.00 0.85 0.79–0.92 9.44 × 10−5
rs6641142 4825493 299 kb 3′ of LOC101928201 1.28 1.14–1.43 2.86 × 10−5 0.95 0.76–1.19 6.58 × 10−1 1.12 0.89–1.41 3.44 × 10−1 0.00 1.19 1.08–1.30 3.01 × 10−4
rs12860876 17037354 REPS2 1.20 1.09–1.31 7.20 × 10−5 0.95 0.81–1.12 5.58 × 10−1 1.01 0.85–1.21 8.86 × 10−1 68.81 1.07 0.92–1.23 3.98 × 10−1
rs2207942 145630047 261 kb 5′ of CXorf51A 1.18 1.08–1.29 4.02 × 10−4 1.14 0.96–1.36 1.43 × 10−1 0.96 0.79–1.17 7.04 × 10−1 0.00 1.14 1.06–1.23 7.30 × 10−4
rs2018094 12272097 FRMPD4 0.86 0.78–0.94 7.69 × 10−4 0.96 0.81–1.14 6.44 × 10−1 0.96 0.8–1.16 6.86 × 10−1 0.00 0.89 0.83–0.96 1.95 × 10−3
rs5910990 119872266 108 kb 3′ of C1GALT1C1 0.86 0.79–0.93 3.86 × 10−4 1.06 0.90–1.25 4.89 × 10−1 1.04 0.86–1.25 6.97 × 10−1 69.11 0.96 0.83–1.12 6.17 × 10−1
rs6528069 21915630 43 kb 5′ of SMS 0.85 0.78–0.93 2.41 × 10−4 1.11 0.94–1.31 2.07 × 10−1 1.11 0.92–1.34 2.76 × 10−1 80.29 1.00 0.83–1.21 9.86 × 10−1
rs5949698 95161542 430 kb 5′ of BRDTP1 1.22 1.10–1.37 3.40 × 10−4 0.86 0.70–1.05 1.39 × 10−1 0.91 0.73–1.12 3.74 × 10−1 80.91 1.00 0.79–1.26 9.90 × 10−1