Table 2 Overlapped X chromosomal DMP-covered genes in two XCI studies
From: Sex-related DNA methylation differences in B cell chronic lymphocytic leukemia
| Â | Zhang et al. | Cotton et al. | ||||
|---|---|---|---|---|---|---|
Always escape | Heterogeneous | Always inactive | Always escape | Heterogeneous | Always inactive | |
X chromosomal DMP-covered genes (n = 407) | 22 | 117 | 82 | 39 | 93 | 147 |
DMR-covered genes (n = 31) | USP9X; UBA1; KDM5C; HCFC1 | SYAP1; MAP7D2; FAAH2; DIAPH2; FAM122B; ATP11C | NLGN3; DRP2; BGN | SYAP1; UBA1 | KAL1; SHROOM2; BEND2; MAP7D2; USP9X; EFHC2; KDM5C; IQSEC2; CD40LG; BGN; HCFC1 | EGFL6; FAAH2; AR; NLGN3; DIAPH2; DRP2; DCX; ATP11C |
X chromosomal DNAm-DEGs (n = 17) | USP9X; DDX3X; CDK16; MED14; EIF1AX; TRAPPC2; STS | ZNF275; ERCC6L; TBC1D25; ZRSR2; MAP7D2; SYAP1; CA5B; CXorf38 | NA | DDX3X; ZRSR2; SYAP1; CA5B; CXorf38; STS | USP9X; TCEANC; CDK16; MED14; MAP7D2; EIF1AX; TRAPPC2; RIBC1 | ZNF275; TBC1D25 |