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Table 1 Cohort of 46,XY DSD cases with uninformative exome sequencing

From: Identification of novel candidate genes for 46,XY disorders of sex development (DSD) using a C57BL/6J-YPOS mouse model

Patient ID

Category

DSD category

Clinical features

RDSD002

1

46,XY female, CGD

RDSD003

1

46,XY female, PGD

No uterus; Fallopian tubes present; short vagina; very low T and undetectable estradiol; gonads not found

RDSD004

1

46,XY female, GD

RDSD006

2

46,XY female

Amelia (missing limbs)

RDSD007

1

46,XY female, GD

Adrenal rests

RDSD010

2

46,XY female

Clitoromegaly

RDSD011

2

46,XY female

Short stature

RDSD012

2

46,XY female

Kidney disease; possible Denys-Drash syndrome

RDSD013

1

46,XY female, CGD

Normal uterus and Fallopian tubes; streak gonads

RDSD018

3

46,XY ambiguous genitalia

Partial fusion of labioscrotal folds; small phallus; penoscrotal hypospadias

RDSD020

3

46,XY ambiguous genitalia

Developmental delay; agenesis of corpus callosum

RDSD021

3

46,XY ambiguous genitalia

Adrenal hypoplasia congenita; dysmorphic features

RDSD022

3

46,XY ambiguous genitalia

Microcephaly; intestinal dysmotility; optic nerve hypoplasia

RDSD025

4

46,XY male, micropenis/cryptochidism

Severe growth and developmental retardation; testes not seen by ultrasound

CDSD029

4

46,XY male, hypospadias

CDSD030

2

46,XY female

Large clitoris; no uterus or vaginal opening; inguinal testes

CDSD031

3

46,XY ambiguous genitalia, CGD

Abdominal gonads with no oocytes; no seminiferous tubules; no clitoromegaly; posterior fusion of labia; urogenital sinus

CDSD032

2

46,XY female

Inguinal testes w/ immature seminiferous tubules; no uterus or Fallopian tubes; deafness; impaired cognition

CDSD034

3

46,XY ambiguous genitalia

Undescended testes; bifid scrotum; hypospadias

CDSD036

3

46,XY ambiguous genitalia

Bilateral descended testes; midshaft hypospadias; chordee

CDSD039

4

46,XY male, micropenis

No uterus or ovaries per ultrasound; ambiguous genitalia; undervirilization

RDSD041

2

46,XY female

Complete androgen insensitivity syndrome

RDSD042

4

46,XY male, hypospadias

RDSD043

1

46,XY female, GD

RDSD044

4

46,XY male, anorchia

Congenital bilateral anorchia; fully formed scrotum; definite penis (mildly shortened); no hypospadias; responsive to testosterone

RDSD045

4

46,XY male, hypospadias/cryptorchidism

Azoospermia; high T levels

RDSD046

2

46,XY female

Multiple congenital anomalies; no uterus; abdominal gonads—testes

RDSD047

4

46,XY male, microphallus

Hypogonadism; hypospadias

RDSD048

4

46,XY male, micropenis

RDSD049

4

46,XY male, hypospadias

CDSD050

4

46,XY male, hypospadias

Chordee; bifid scrotum; cryptorchidism

CDSD051

2

46,XY female

Growth delay; short stature

  1. Anatomical description follows the standardized nomenclature in Hennekam et al. [55], except when only historical description was available in patient’s file. Patient IDs refer to cases enrolled for research purposes (RDSD) or enrolled through the UCLA clinical genomic center (CDSD). Numbering is not consecutive to maintain consistency with the numbering in Baxter et al. [22] for patients who are in both cohorts
  2. CGD/PGD complete/partial gonadal dysgenesis