From: Sex differences in the late first trimester human placenta transcriptome
# | Gene symbol | Chr | Description | TPM highest in placenta?^{a} | Placenta specific?^{b} | Where else expressed?^{b} | Upregulated in first vs term^{c} |
---|---|---|---|---|---|---|---|
1 | KISS1 | 1 | KiSS-1 metastasis-suppressor | + + + | N | Term | |
2 | CGA | 6 | Glycoprotein hormones, alpha polypeptide | N | N | ||
3 | TFPI2 | 7 | Tissue factor pathway inhibitor 2 | N | N | ||
4 | CSH1 | 17 | Chorionic somatomammotropin hormone 1 | + + | N | ||
5 | CSH2 | 17 | Chorionic somatomammotropin hormone 2 | + | N | ||
6 | CGB8 | 19 | Chorionic gonadotropin beta subunit 8 | + + | Almost | Embryonic tissue, skin | |
7 | CGB5 | 19 | Chorionic gonadotropin beta subunit 5 | + + | Almost | Embryonic tissue, testis, heart, skin | |
8 | SPP1 | 4 | Secreted phosphoprotein 1 | N | N | ||
9 | TMSB10 | 2 | Thymosin beta 10 | N | N | ||
10 | EEF1A1 | 6 | Eukaryotic translation elongation factor 1 alpha 1 | N | N | ||
11 | PEG10 | 7 | Paternally expressed 10 | N | N | ||
12 | FTL | 19 | Ferritin light chain | N | N | ||
13 | CGB3 | 19 | Chorionic gonadotropin beta subunit 3 | + + | Almost | Embryonic tissue, connective tissue, testis, ovary | |
14 | RPS12 | 6 | Ribosomal protein S12 | N | N | ||
15 | PSG3 | 19 | Pregnancy specific beta-1-glycoprotein 3 | + + + | Almost | Vascular, testis, muscle, kidney, intestine, skin | Term |
16 | ACTB | 7 | Actin beta | N | N | ||
17 | IFI6 | 1 | Interferon alpha inducible protein 6 | N | N | ||
18 | COL3A1 | 2 | Collagen type III alpha 1 chain | N | N | ||
19 | GDF15 | 19 | Growth differentiation factor 15 | + + | N | Term | |
20 | PAGE4 | X | PAGE family member 4 | + | N | Prostate, heart | |
21 | RPS27 | 1 | Ribosomal protein S27 | N | N | ||
22 | ACTG1 | 17 | Actin gamma 1 | N | N | ||
23 | FN1 | 2 | Fibronectin 1 | N | N | ||
24 | RPL13A | 19 | Ribosomal protein L13a | N | N | ||
25 | HIST1H1C | 6 | Histone cluster 1 H1 family member c | N | N | ||
26 | RPS11 | 19 | Ribosomal protein S11 | N | N | ||
27 | S100A11 | 1 | S100 calcium binding protein A11 | N | N | ||
28 | HIST1H2BK | 6 | Histone cluster 1 H2B family member k | N | N | ||
29 | HIST1H3B | 6 | Histone cluster 1 H3 family member b | No value | Almost | Thymus, liver, kidney, testis | |
30 | HIST1H1E | 6 | Histone cluster 1 H1 family member e | No value | Almost | Mouth, kidney, brain | |
31 | PSAP | 10 | Prosaposin | N | N | ||
32 | EEF2 | 19 | Eukaryotic translation elongation factor 2 | N | N | ||
33 | RPS18 | 6 | Ribosomal protein S18 | N | N | ||
34 | RPL10A | 6 | Ribosomal protein L10a | N | N | ||
35 | CALR | 19 | Calreticulin | N | N | ||
36 | HIST1H1B | 6 | Histone cluster 1 H1 family member b | No value | Almost | Bladder, intestine, skin | |
37 | TGM2 | 20 | Transglutaminase 2 | N | N | ||
38 | RPL7A | 9 | Ribosomal protein L7a | N | N | ||
39 | SAT1 | X | Spermidine/spermine N1-acetyltransferase 1 | N | N | ||
40 | XAGE3 | X | X antigen family member 3 | + | Yes | ||
41 | HIST1H4D | 6 | Histone cluster 1 H4 family member d | No value | Almost | Adipose tissue, vascular | |
42 | HSPA8 | 11 | Heat shock protein family A (Hsp70) member 8 | N | N | ||
43 | PSG4 | 19 | Pregnancy specific beta-1-glycoprotein 4 | + + | N | Term | |
44 | GAPDH | 12 | Glyceraldehyde-3-phosphate dehydrogenase | N | N | ||
45 | EBI3 | 19 | Epstein-Barr virus induced 3 | No value* | N | Term | |
46 | RPS4X | X | Ribosomal protein S4, X-linked | N | N | ||
47 | RPS6 | 9 | Ribosomal protein S6 | N | N | ||
48 | RPS8 | 1 | Ribosomal protein S8 | N | N | ||
49 | EFEMP1 | 2 | EGF containing fibulin-like extracellular matrix protein 1 | N | N | ||
50 | RPLP0 | 12 | Ribosomal protein lateral stalk subunit P0 | N | N | ||
51 | ADAM12 | 10 | ADAM metallopeptidase domain 12 | + + | N | Term | |
52 | S100A9 | 1 | S100 calcium binding protein A9 | N | N | Term | |
53 | CYP19A1 | 15 | Cytochrome P450 family 19 subfamily A member 1 | + + + | N | Term | |
54 | COL4A1 | 13 | Collagen type IV alpha 1 chain | N | N | ||
55 | ANXA5 | 4 | Annexin A5 | N | N | ||
56 | RPL19 | 17 | Ribosomal protein L19 | N | N | ||
57 | KRT18 | 12 | Keratin 18 | N | N | ||
58 | XAGE2 | X | X antigen family member 2 | + + | Almost | Heart, uterus | |
59 | HSP90AB1 | 6 | Heat shock protein 90 alpha family class B member 1 | N | N | ||
60 | HIST1H4C | 6 | Histone cluster 1 H4 family member c | No value | N | ||
61 | IGF2 | 11 | Insulin-like growth factor 2 | N | N | ||
62 | HSD3B1 | 1 | Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 | + + | N | ||
63 | EZR | 6 | Ezrin | N | N | ||
64 | SLC2A1 | 1 | Solute carrier family 2 member 1 | N | N | Term | |
65 | RPS2 | 16 | Ribosomal protein S2 | N | N | ||
66 | FBLN1 | 22 | Fibulin 1 | + | N | Term | |
67 | S100P | 4 | S100 calcium binding protein P | N | N | Term | |
68 | SDC1 | 2 | Syndecan 1 | N | N | Term | |
69 | HIST1H3F | 6 | Histone cluster 1 H3 family member f | No value | Almost | Liver, connective tissue, skin | |
70 | CTSL | 9 | Cathepsin L | N | N | ||
71 | HIST1H4F | 6 | Histone cluster 1 H4 family member f | No value | Almost | Blood, connective tissue | |
72 | PSG1 | 19 | Pregnancy specific beta-1-glycoprotein 1 | + + + | N | Term | |
73 | RPS25 | 11 | Ribosomal protein S25 | N | N | ||
74 | PSG5 | 19 | Pregnancy specific beta-1-glycoprotein 5 | + + | N | ||
75 | PLAC4 | 21 | Placenta specific 4 | + + + | N | ||
76 | RPL11 | 1 | Ribosomal protein L11 | N | N | ||
77 | SPARC | 5 | Secreted protein acidic and cysteine rich | N | N | ||
78 | KRT19 | 17 | Keratin 19 | N | N | ||
79 | PSG2 | 19 | Pregnancy specific beta-1-glycoprotein 2 | + + + | N | ||
80 | RPL8 | 8 | Ribosomal protein L8 | N | N | ||
81 | HSP90B1 | 12 | Heat shock protein 90 beta family member 1 | N | N | ||
82 | GPC3 | X | Glypican 3 | N | N | ||
83 | RPL7 | 8 | Ribosomal protein L7 | N | N | ||
84 | PAPPA2 | 1 | Pappalysin 2 | + + | N | Term | |
85 | KRT8 | 12 | Keratin 8 | + | N | ||
86 | RPL5 | 1 | Ribosomal protein L5 | N | N | ||
87 | GH2 | 17 | Growth hormone 2 | + | N | ||
88 | MEST | 7 | Mesoderm specific transcript | N | N | ||
89 | RPN2 | 20 | Ribophorin II | N | N | ||
90 | PRDX5 | 11 | Peroxiredoxin 5 | N | N | ||
91 | GSTP1 | 11 | Glutathione S-transferase pi 1 | N | N | ||
92 | LDHB | 12 | Lactate dehydrogenase B | N | N | ||
93 | HIST1H3C | 6 | Histone cluster 1 H3 family member c | No value | Almost | Testis | |
94 | VGLL1 | X | Vestigial-like family member 1 | + + | N | ||
95 | RPL4 | 15 | Ribosomal protein L4 | N | N | ||
96 | ENO1 | 1 | Enolase 1 | N | N | First | |
97 | PAPPA | 9 | Pappalysin 1 | + + | N | Term | |
98 | COL4A2 | 13 | Collagen type IV alpha 2 chain | N | N | ||
99 | RPS3A | 4 | Ribosomal protein S3A | N | N | ||
100 | SLC40A1 | 2 | Solute carrier family 40 member 1 | N | N | ||
101 | TIMP3 | 22 | TIMP metallopeptidase inhibitor 3 | N | N | ||
102 | ANXA1 | 9 | Annexin A1 | N | N | ||
103 | RPL35 | 9 | Ribosomal protein L35 | N | N | ||
104 | TPT1 | 13 | Tumor protein, translationally controlled 1 | N | N | ||
105 | EPAS1 | 2 | Endothelial PAS domain protein 1 | N | N | ||
106 | HIST1H2BI | 6 | Histone cluster 1 H2B family member i | No value | Yes | No value in any UniGene body site | |
107 | S100A6 | 1 | S100 calcium binding protein A6 | N | N | ||
108 | RPL3 | 22 | Ribosomal protein L3 | N | N | ||
109 | RPL12 | 9 | Ribosomal protein L12 | N | N | ||
110 | DUSP9 | X | Dual specificity phosphatase 9 | N | N | ||
111 | PSG9 | 19 | Pregnancy specific beta-1-lycoprotein 9 | + + + | Almost | Vascular, spleen, eye,mammary gland, lung, skin | Term |
112 | FOXO4 | X | Forkhead box O4 | + + | N | ||
113 | PEG3 | 19 | Paternally expressed 3 | N | N | ||
114 | RPL41 | 12 | Ribosomal protein L41 | N | N | ||
115 | FAM129B | 9 | Family with sequence similarity 129 member B | N | N | ||
116 | PDIA3 | 15 | Protein disulfide isomerase family A member 3 | N | N | ||
117 | HIST1H4B | 6 | Histone cluster 1 H4 family member b | No value | Almost | Lymph node, testis, liver | |
118 | MYL12B | 18 | Myosin light chain 12B | N | N | ||
119 | HIST1H1D | 6 | Histone cluster 1 H1 family member d | No value | N | ||
120 | SPINT1 | 15 | Serine peptidase inhibitor, Kunitz type 1 | + | N | ||
121 | RPLP2 | 11 | Ribosomal protein lateral stalk subunit P2 | N | N | ||
122 | FBN2 | 5 | Fibrillin 2 | + | N | ||
123 | RPS27A | 2 | Ribosomal protein S27a | N | N | ||
124 | BSG | 19 | Basigin (Ok blood group) | N | N | ||
125 | CTNNB1 | 3 | Catenin beta 1 | N | N | ||
126 | RPL21 | 13 | Ribosomal protein L21 | N | N | ||
127 | COL6A2 | 21 | Collagen type VI alpha 2 chain | N | N | First | |
128 | RASA1 | 5 | RAS p21 protein activator 1 | + + | N | ||
129 | ATP5B | 12 | ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide | N | N | ||
130 | RPS20 | 8 | Ribosomal protein S20 | N | N | ||
131 | RPS13 | 11 | Ribosomal protein S13 | N | N | ||
132 | CANX | 5 | Calnexin | N | N | ||
133 | ISM2 | 14 | Isthmin 2 | + + + | N | ||
134 | RPL9 | 4 | Ribosomal protein L9 | N | N | ||
135 | HBG2 | 11 | Hemoglobin subunit gamma 2 | N | N | ||
136 | RACK1 | 5 | Receptor for activated C kinase 1 | N | N | ||
137 | LUM | 12 | Lumican | N | N | ||
138 | NPM1 | 5 | Nucleophosmin | N | N | ||
139 | HIST1H2BO | 6 | Histone cluster 1 H2B family member o | No value* | Almost | Liver | |
140 | PEBP1 | 12 | Phosphatidylethanolamine binding protein 1 | N | N | ||
141 | RPL10 | X | Ribosomal protein L10 | N | N | ||
142 | P4HB | 17 | Prolyl 4-hydroxylase subunit beta | N | N | ||
143 | IGFBP3 | 7 | Insulin-like growth factor binding protein 3 | N | N | ||
144 | EIF4G2 | 11 | Eukaryotic translation initiation factor 4 gamma 2 | N | N | ||
145 | CD63 | 12 | CD63 molecule | N | N | ||
146 | PRDX1 | 1 | Peroxiredoxin 1 | N | N | ||
147 | CD24 | 6 | CD24 molecule | N | N | First | |
148 | YBX1 | 1 | Y-box binding protein 1 | N | N | ||
149 | BEX3 | X | Brain expressed X-linked 3 | N | N | ||
150 | HSPA5 | 9 | Heat shock protein family A (Hsp70) member 5 | N | N | ||
151 | UBC | 12 | Ubiquitin C | N | N | ||
152 | MBNL3 | X | Muscleblind-like splicing regulator 3 | + | N | ||
153 | RPS19 | 19 | Ribosomal protein S19 | N | N | ||
154 | RPS14 | 5 | Ribosomal protein S14 | N | N | ||
155 | PFN1 | 17 | Profilin 1 | N | N | ||
156 | RHOA | 3 | Ras homolog family member A | N | N | ||
157 | HIST1H2BD | 6 | Histone cluster 1 H2B family member d | N | N | ||
158 | COX8A | 11 | Cytochrome c oxidase subunit 8A | N | N | ||
159 | TCEAL9 | X | Transcription elongation factor A like 9 | N | N | ||
160 | TMSB4X | X | Thymosin beta 4, X-linked | N | N | ||
161 | HSPB8 | 12 | Heat shock protein family B (small) member 8 | + | N | Term | |
162 | KRT7 | 12 | Keratin 7 | N | N | First | |
163 | TINAGL1 | 1 | Tubulointerstitial nephritis antigen-like 1 | + | N | ||
164 | RPL27 | 17 | Ribosomal protein L27 | N | N | ||
165 | HSP90AA1 | 14 | Heat shock protein 90 alpha family class A member 1 | N | N | ||
166 | HBA2 | 16 | Hemoglobin subunit alpha 2 | N | |||
167 | RRBP1 | 20 | Ribosome binding protein 1 | N | |||
168 | HMGA1 | 6 | High mobility group AT-hook 1 | N | N | First | |
169 | TPI1 | 12 | Triosephosphate isomerase 1 | N | N | ||
170 | PTMA | 2 | Prothymosin, alpha | N | N | ||
171 | RPSA | 3 | Ribosomal protein SA | N | N | ||
172 | CHCHD2 | 7 | Coiled-coil-helix-coiled-coil-helix domain containing 2 | N | N | ||
173 | RPL6 | 12 | Ribosomal protein L6 | N | N | ||
174 | PSG6 | 19 | Pregnancy specific beta-1-glycoprotein 6 | + + | Almost | Vascular, heart, skin, intestine | Term |
175 | UBB | 17 | Ubiquitin B | N | N |