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Table 3 Distribution of cells with simultaneous detection of PCDH11X/Y and NLGN4X/Y transcripts

From: Spatial sexual dimorphism of X and Y homolog gene expression in the human central nervous system during early male development

Sample ID

Tissue

Gene

Gender

Total cell counts

Cells with PX > = 1

Cells with PY > = 1

Cells with NX > = 1

Cells with NY > = 1

Cells with PX + Y > = 2

Cells with NX + Y > = 2

Cells with PX + NX > = 2

Cells with PY + NY > = 2

E49_S82

SC

Dual

Female

5097

247

16

282

6

0

1

38

2

E33_S63

MO

Dual

Female

17,390

993

36

1671

39

1

12

153

4

E34_S63

MO

Dual

Female

27,485

1292

71

2940

68

5

25

302

2

E32_S84

SC

Dual

Male

4939

208

241

278

353

32

49

31

16

E41_S58

MO

Dual

Male

7386

318

75

566

573

8

367

39

15

E58_S82

MO

Dual

Male

11,331

887

241

1108

977

100

361

207

50

E61_S72

MO

Dual

Male

7472

322

155

245

628

13

60

31

27

E45_S329

Midbrain

Dual

Male

26,061

1084

447

1625

1714

46

335

142

42

E47_S72

Midbrain

Dual

Male

9433

421

107

591

530

15

56

42

16

Sample ID

Tissue

Gene

Gender

 

Cells with PX + NY > = 2

Cells with PY + NX > = 2

Cells with PX + NX + NY > = 3

Cells with PY + NX + NY > = 3

Cells with PX + PY + NX > = 3

Cells with PX + PY + NY > = 3

Cells with PXandY + NXandY > = 4

Cells with no signals

E49_S82

SC

Dual

Female

 

1

0

0

0

0

0

0

4504

E33_S63

MO

Dual

Female

 

7

5

2

0

2

0

0

14,467

E34_S63

MO

Dual

Female

 

5

9

4

3

4

3

1

22,751

E32_S84

SC

Dual

Male

 

38

23

11

7

11

7

2

3639

E41_S58

MO

Dual

Male

 

43

5

50

4

50

4

0

5318

E58_S82

MO

Dual

Male

 

169

58

100

22

100

22

8

6991

E61_S72

MO

Dual

Male

 

50

15

4

3

4

3

1

5915

E45_S329

Midbrain

Dual

Male

 

141

74

29

20

29

20

5

20,338

E47_S72

Midbrain

Dual

Male

 

46

17

6

2

6

2

0

7581

  1. The table shows the total number of signals for each gene, and the total number of cells identified by CellProfiler, for each sample hybridized simultaneously with padlock probes for the four X or Y genes: PCDH11X (PX), PCDH11Y (PY), NLGN4X (NX) and NLGNY (NY)