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Table 3 Distribution of cells with simultaneous detection of PCDH11X/Y and NLGN4X/Y transcripts

From: Spatial sexual dimorphism of X and Y homolog gene expression in the human central nervous system during early male development

Sample ID Tissue Gene Gender Total cell counts Cells with PX > = 1 Cells with PY > = 1 Cells with NX > = 1 Cells with NY > = 1 Cells with PX + Y > = 2 Cells with NX + Y > = 2 Cells with PX + NX > = 2 Cells with PY + NY > = 2
E49_S82 SC Dual Female 5097 247 16 282 6 0 1 38 2
E33_S63 MO Dual Female 17,390 993 36 1671 39 1 12 153 4
E34_S63 MO Dual Female 27,485 1292 71 2940 68 5 25 302 2
E32_S84 SC Dual Male 4939 208 241 278 353 32 49 31 16
E41_S58 MO Dual Male 7386 318 75 566 573 8 367 39 15
E58_S82 MO Dual Male 11,331 887 241 1108 977 100 361 207 50
E61_S72 MO Dual Male 7472 322 155 245 628 13 60 31 27
E45_S329 Midbrain Dual Male 26,061 1084 447 1625 1714 46 335 142 42
E47_S72 Midbrain Dual Male 9433 421 107 591 530 15 56 42 16
Sample ID Tissue Gene Gender   Cells with PX + NY > = 2 Cells with PY + NX > = 2 Cells with PX + NX + NY > = 3 Cells with PY + NX + NY > = 3 Cells with PX + PY + NX > = 3 Cells with PX + PY + NY > = 3 Cells with PXandY + NXandY > = 4 Cells with no signals
E49_S82 SC Dual Female   1 0 0 0 0 0 0 4504
E33_S63 MO Dual Female   7 5 2 0 2 0 0 14,467
E34_S63 MO Dual Female   5 9 4 3 4 3 1 22,751
E32_S84 SC Dual Male   38 23 11 7 11 7 2 3639
E41_S58 MO Dual Male   43 5 50 4 50 4 0 5318
E58_S82 MO Dual Male   169 58 100 22 100 22 8 6991
E61_S72 MO Dual Male   50 15 4 3 4 3 1 5915
E45_S329 Midbrain Dual Male   141 74 29 20 29 20 5 20,338
E47_S72 Midbrain Dual Male   46 17 6 2 6 2 0 7581
  1. The table shows the total number of signals for each gene, and the total number of cells identified by CellProfiler, for each sample hybridized simultaneously with padlock probes for the four X or Y genes: PCDH11X (PX), PCDH11Y (PY), NLGN4X (NX) and NLGNY (NY)