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Table 3 Genes showing developmental changes are enriched for genes altered by hypophysectomy

From: Sex-specific mouse liver gene expression: genome-wide analysis of developmental changes from pre-pubertal period to young adulthood

A. Background: All genes (22,635)

Genes up regulated in male hypophysectomized liver (2,250 genes)

Genes down regulated in male hypophysectomized liver (2,202 genes)

 

# of overlapping genes

Fold enrichment

Fisher Test p -value

# of overlapping genes

Fold enrichment

Fisher Test p -value

All genes up regulated in male liver 3-8 wk (1,542 genes)

213

1.39

3.05E-06

306

2.04

2.13E-30

All genes down regulated in male liver 3-8 wk (1,773 genes)

393

2.23

7.12E-47

163

0.95

0.479

B. Background: All genes (22,635)

Genes up regulated in female hypophysectomized liver (1,521 genes)

Genes down regulated in female hypophysectomized liver (1,535 genes)

 

# of overlapping genes

Fold enrichment

Fisher Test p-value

# of overlapping genes

Fold enrichment

Fisher Test p-value

All genes up regulated in female liver 3-8 wk (1,070 genes)

131

1.82

2.38E-10

151

2.08

2.91E-16

All genes down regulated in female liver 3-8 wk (1,364 genes)

203

2.21

5.87E-24

139

1.50

5.16E-06

  1. Genes identified in the present microarray study were grouped based on their regulation from 3 wk to 8 wk and compared to genes from a previous microarray study [27] grouped by their response to hypophysectomy. Enrichments were calculated as described in Table 2. Total numbers of genes comprising each group are shown in parenthesis. Bold text indicates enrichment with a highly significant p-value (p < 0.0001, Fisher's exact test).